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1

High-throughput single-cell transcriptomics of bacteria usi..:

Gaisser, Karl D. ; Skloss, Sophie N. ; Brettner, Leandra M....
Nature Protocols. , 2024

Link: https://doi.org/10.1038/..

2

A comprehensive analysis of gene expression changes in a hi..:

Grancharova, Tanya ; Gerbin, Kaytlyn A. ; Rosenberg, Alexander B....
Scientific Reports. 11 (2021) 1 - p. , 2021

Link: https://doi.org/10.1038/..

3

Spatial and cell type transcriptional landscape of human ce..:

Aldinger, Kimberly A. ; Thomson, Zachary ; Phelps, Ian G....
Nature Neuroscience. 24 (2021) 8 - p. 1163-1175 , 2021

Link: https://doi.org/10.1038/..

4

Microbial single-cell RNA sequencing by split-pool barcodin:

Kuchina, Anna ; Brettner, Leandra M. ; Paleologu, Luana...
Science. 371 (2021) 6531 - p. , 2021

Link: https://doi.org/10.1126/..

5

A Generative Neural Network for Maximizing Fitness and Dive..:

Linder, Johannes ; Bogard, Nicholas ; Rosenberg, Alexander B..
Cell Systems. 11 (2020) 1 - p. 49-62.e16 , 2020

Link: https://doi.org/10.1016/..

6

A Deep Neural Network for Predicting and Engineering Altern..:

Bogard, Nicholas ; Linder, Johannes ; Rosenberg, Alexander B..
Cell. 178 (2019) 1 - p. 91-106.e23 , 2019

Link: https://doi.org/10.1016/..

7

Redefining the Etiologic Landscape of Cerebellar Malformati..:

Aldinger, Kimberly A. ; Timms, Andrew E. ; Thomson, Zachary...
The American Journal of Human Genetics. 105 (2019) 3 - p. 606-615 , 2019

Link: https://doi.org/10.1016/..

8

Degenerate minigene library analysis enables identification..:

Gupta, Abhishek K ; Murthy, Tushar ; Paul, Kiran V...
Nucleic Acids Research. 47 (2018) 2 - p. 970-980 , 2018

Link: https://doi.org/10.1093/..

9

Single-cell profiling of the developing mouse brain and spi..:

Rosenberg, Alexander B. ; Roco, Charles M. ; Muscat, Richard A....
Science. 360 (2018) 6385 - p. 176-182 , 2018

Link: https://doi.org/10.1126/..

10

Deep learning of the regulatory grammar of yeast 5′ untrans..:

Cuperus, Josh T. ; Groves, Benjamin ; Kuchina, Anna...
Genome Research. 27 (2017) 12 - p. 2015-2024 , 2017

Link: https://doi.org/10.1101/..

11

Learning the Sequence Determinants of Alternative Splicing ..:

Rosenberg, Alexander B. ; Patwardhan, Rupali P. ; Shendure, Jay.
Cell. 163 (2015) 3 - p. 698-711 , 2015

Link: https://doi.org/10.1016/..

12

MicroRNA-Based Single-Gene Circuits Buffer Protein Synthesi..:

Strovas, Timothy J. ; Rosenberg, Alexander B. ; Kuypers, Brianna E...
ACS Synthetic Biology. 3 (2014) 5 - p. 324-331 , 2014

Link: https://doi.org/10.1021/..

13

Spatial and cell-type transcriptional landscape of human ce..:

Aldinger, Kimberly A ; Thomson, Zach ; Phelps, Ian G...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8338761/. , 2021

Link: http://www.ncbi.nlm.nih...

14

A comprehensive analysis of gene expression changes in a hi..:

Grancharova, Tanya ; Gerbin, Kaytlyn A ; Rosenberg, Alexander B...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8338992/. , 2021

Link: http://www.ncbi.nlm.nih...

15

A Generative Neural Network for Maximizing Fitness and Dive..:

Linder, Johannes ; Bogard, Nicholas ; Rosenberg, Alexander B.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8694568/. , 2020

Link: http://www.ncbi.nlm.nih...

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