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Sharir‐Ivry, Avital
43
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Online (43)
Mediatypes
Articles (Online) (12)
OpenAccess-fulltext (31)
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1
Valence Bond and Enzyme Catalysis: A Time To Break Down and..:
Sharir‐Ivry, Avital
;
Varatharaj, Rajapandian
;
Shurki, Avital
Chemistry – A European Journal. 21 (2015) 19 - p. 7159-7169 , 2015
Link:
https://doi.org/10.1002/..
?
2
Valence Bond‐Based Hybrid Quantum Mechanics Molecular Mecha..:
Shurki, Avital
;
Sharir‐Ivry, Avital
Israel Journal of Chemistry. 54 (2014) 8-9 - p. 1189-1204 , 2014
Link:
https://doi.org/10.1002/..
?
3
Quantifying evolutionary importance of protein sites: A Tal..:
Sharir-Ivry, Avital
;
Xia, Yu
;
Zhang, Jianzhi
PLOS Genetics. 17 (2021) 4 - p. e1009476 , 2021
Link:
https://doi.org/10.1371/..
?
4
Using Pseudoenzymes to Probe Evolutionary Design Principles..:
Sharir-Ivry, Avital
;
Xia, Yu
Evolutionary Bioinformatics. 15 (2019) - p. 117693431985593 , 2019
Link:
https://doi.org/10.1177/..
?
5
Non-catalytic Binding Sites Induce Weaker Long-Range Evolut..:
Sharir-Ivry, Avital
;
Xia, Yu
Journal of Molecular Biology. 431 (2019) 19 - p. 3860-3870 , 2019
Link:
https://doi.org/10.1016/..
?
6
Nature of Long-Range Evolutionary Constraint in Enzymes: In..:
Sharir-Ivry, Avital
;
Xia, Yu
;
Wilke, Claus
Molecular Biology and Evolution. 35 (2018) 11 - p. 2597-2606 , 2018
Link:
https://doi.org/10.1093/..
?
7
The Impact of Native State Switching on Protein Sequence Ev..:
Sharir-Ivry, Avital
;
Xia, Yu
Molecular Biology and Evolution. 34 (2017) 6 - p. 1378-1390 , 2017
Link:
https://doi.org/10.1093/..
?
8
Challenges within the Linear Response Approximation When St..:
Sharir-Ivry, Avital
;
Varatharaj, Rajapandian
;
Shurki, Avital
Journal of Chemical Theory and Computation. 11 (2014) 1 - p. 293-302 , 2014
Link:
https://doi.org/10.1021/..
?
9
VB/MM Protein Landscapes: A Study of the SN2 Reaction in Ha..:
Sharir-Ivry, Avital
;
Shnerb, Tamar
;
Štrajbl, Marek
.
The Journal of Physical Chemistry B. 114 (2010) 6 - p. 2212-2218 , 2010
Link:
https://doi.org/10.1021/..
?
10
Density Embedded VB/MM: A Hybrid ab Initio VB/MM with Elec..:
Sharir-Ivry, Avital
;
Crown, Hadar A.
;
Wu, Wei
.
The Journal of Physical Chemistry A. 112 (2008) 11 - p. 2489-2496 , 2008
Link:
https://doi.org/10.1021/..
?
11
A VB/MM View of the Identity SN2 Valence-Bond State Correla..:
Sharir-Ivry, Avital
;
Shurki, Avital
The Journal of Physical Chemistry A. 112 (2008) 50 - p. 13157-13163 , 2008
Link:
https://doi.org/10.1021/..
?
12
VB/MM—The Validity of the Underlying Approximations:
Sharir-Ivry, Avital
;
Shurki, Avital
The Journal of Physical Chemistry B. 112 (2008) 39 - p. 12491-12497 , 2008
Link:
https://doi.org/10.1021/..
?
13
Quantifying evolutionary importance of protein sites: A Tal..:
Avital Sharir-Ivry
;
Yu Xia
https://doi.org/10.1371/journal.pgen.1009476. , 2021
Link:
https://doi.org/10.1371/..
?
14
Using Pseudoenzymes to Probe Evolutionary Design Principles..:
Avital Sharir-Ivry
;
Yu Xia
https://doi.org/10.1177/1176934319855937. , 2019
Link:
https://doi.org/10.1177/..
?
15
Average conservation gradient after reduction of the relati..:
Avital Sharir-Ivry (1691308)
;
Yu Xia (8822)
https://figshare.com/articles/figure/Average_conservation_gradient_after_reduction_of_the_relative_contribution_of_proximity_to_the_protein_center_as_a_function_of_average_evolutionary_rate_dN_dS_for_all_yeast_protein_residues_binned_according_to_their_annotated_conservation_r/14382420. , 2021
Link:
https://doi.org/10.1371/..
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