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Shifman, Julia M
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1

Cold Spot SCANNER: Colab Notebook for predicting cold spots..:

Gurusinghe, Sagara N. S. ; Shifman, Julia M.
BMC Bioinformatics.  25 (2024)  1 - p. , 2024
Link: https://doi.org/10.1186/..
 
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2

Targeting Ras with protein engineering:

Tomazini, Atilio ; Shifman, Julia M.
Oncotarget.  14 (2023)  1 - p. 672-687 , 2023
Link: https://doi.org/10.18632..
 
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3

Designed Loop Extension Followed by Combinatorial Screening..:

Bonadio, Alessandro ; Wenig, Bernhard L. ; Hockla, Alexandra..
Journal of Molecular Biology.  435 (2023)  13 - p. 168095 , 2023
Link: https://doi.org/10.1016/..
 
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4

Cold spots are universal in protein–protein interactions:

Gurusinghe, Sagara N.S. ; Oppenheimer, Ben ; Shifman, Julia M.
Protein Science.  31 (2022)  10 - p. , 2022
Link: https://doi.org/10.1002/..
 
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5

Computational design and experimental optimization of prote..:

Bonadio, Alessandro ; Shifman, Julia M
Protein Engineering, Design and Selection.  34 (2021)  - p. , 2021
Link: https://doi.org/10.1093/..
 
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6

Climbing Up and Down Binding Landscapes through Deep Mutati..:

Heyne, Michael ; Shirian, Jason ; Cohen, Itay...
Journal of the American Chemical Society.  143 (2021)  41 - p. 17261-17275 , 2021
Link: https://doi.org/10.1021/..
 
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7

Engineered variants of the Ras effector protein RASSF5 (NOR..:

Singh, Anamika ; Erijman, Ariel ; Noronha, Ashish...
Journal of Biological Chemistry.  297 (2021)  6 - p. 101353 , 2021
Link: https://doi.org/10.1016/..
 
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8

Generating quantitative binding landscapes through fraction..:

Heyne, Michael ; Papo, Niv ; Shifman, Julia M.
Nature Communications.  11 (2020)  1 - p. , 2020
Link: https://doi.org/10.1038/..
 
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9

Allosteric Modulation of Binding Specificity by Alternative..:

Ben-David, Moshe ; Huang, Haiming ; Sun, Mark G.F....
Journal of Molecular Biology.  431 (2019)  2 - p. 336-350 , 2019
Link: https://doi.org/10.1016/..
 
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10

Converting a broad matrix metalloproteinase family inhibito..:

Shirian, Jason ; Arkadash, Valeria ; Cohen, Itay...
FEBS Letters.  592 (2018)  7 - p. 1122-1134 , 2018
Link: https://doi.org/10.1002/..
 
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11

Development of High Affinity and High Specificity Inhibitor..:

Arkadash, Valeria ; Yosef, Gal ; Shirian, Jason...
Journal of Biological Chemistry.  292 (2017)  8 - p. 3481-3495 , 2017
Link: https://doi.org/10.1074/..
 
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12

Analysis of Structural Features Contributing to Weak Affini..:

Cohen, Ariel ; Rosenthal, Eran ; Shifman, Julia M.
Journal of Molecular Biology.  429 (2017)  22 - p. 3353-3362 , 2017
Link: https://doi.org/10.1016/..
 
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13

Identifying Residues that Determine SCF Molecular-Level Int..:

Rabinovich, Eitan ; Heyne, Michael ; Bakhman, Anna...
Journal of Molecular Biology.  429 (2017)  1 - p. 97-114 , 2017
Link: https://doi.org/10.1016/..
 
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14

Editorial overview: Engineering and design: New trends in d..:

Shifman, Julia M ; Papo, Niv
Current Opinion in Structural Biology.  45 (2017)  - p. iv-vi , 2017
Link: https://doi.org/10.1016/..
 
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15

Saturation scanning of ubiquitin variants reveals a common ..:

Leung, Isabel ; Dekel, Ayelet ; Shifman, Julia M..
Proceedings of the National Academy of Sciences.  113 (2016)  31 - p. 8705-8710 , 2016
Link: https://doi.org/10.1073/..
 
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