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Shteynberg, David D.
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1

Trans-Proteomic Pipeline: Robust Mass Spectrometry-Based Pr..:

Deutsch, Eric W. ; Mendoza, Luis ; Shteynberg, David D....
Journal of Proteome Research.  22 (2023)  2 - p. 615-624 , 2023
Link: https://doi.org/10.1021/..
 
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2

A comprehensive spectral assay library to quantify the Halo..:

Kusebauch, Ulrike ; Lorenzetti, Alan P. R. ; Campbell, David S....
Scientific Data.  10 (2023)  1 - p. , 2023
Link: https://doi.org/10.1038/..
 
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3

Improved Analysis of Cross-Linking Mass Spectrometry Data w..:

Hoopmann, Michael R. ; Shteynberg, David D. ; Zelter, Alex...
Journal of Proteome Research.  22 (2023)  2 - p. 647-655 , 2023
Link: https://doi.org/10.1021/..
 
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4

A comprehensive spectral assay library to quantify the Esch..:

Midha, Mukul K. ; Kusebauch, Ulrike ; Shteynberg, David...
Scientific Data.  7 (2020)  1 - p. , 2020
Link: https://doi.org/10.1038/..
 
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5

Insights from the First Phosphopeptide Challenge of the MS ..:

Hoopmann, Michael R. ; Kusebauch, Ulrike ; Palmblad, Magnus...
Journal of Proteome Research.  19 (2020)  12 - p. 4754-4765 , 2020
Link: https://doi.org/10.1021/..
 
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6

PTMProphet: Fast and Accurate Mass Modification Localizatio..:

Shteynberg, David D. ; Deutsch, Eric W. ; Campbell, David S....
Journal of Proteome Research.  18 (2019)  12 - p. 4262-4272 , 2019
Link: https://doi.org/10.1021/..
 
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7

Flexible and Fast Mapping of Peptides to a Proteome with Pr..:

Mendoza, Luis ; Deutsch, Eric W. ; Sun, Zhi...
Journal of Proteome Research.  17 (2018)  12 - p. 4337-4344 , 2018
Link: https://doi.org/10.1021/..
 
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8

A Tandem Mass Spectrometry Sequence Database Search Method ..:

Swearingen, Kristian E. ; Eng, Jimmy K. ; Shteynberg, David...
Journal of Proteome Research.  18 (2018)  2 - p. 652-663 , 2018
Link: https://doi.org/10.1021/..
 
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9

Tiered Human Integrated Sequence Search Databases for Shotg..:

Deutsch, Eric W. ; Sun, Zhi ; Campbell, David S....
Journal of Proteome Research.  15 (2016)  11 - p. 4091-4100 , 2016
Link: https://doi.org/10.1021/..
 
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10

Opening a SWATH Window on Posttranslational Modifications: ..:

Keller, Andrew ; Bader, Samuel L. ; Kusebauch, Ulrike...
Molecular & Cellular Proteomics.  15 (2016)  3 - p. 1151-1163 , 2016
Link: https://doi.org/10.1074/..
 
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11

An Open Data Format for Visualization and Analysis of Cross..:

Hoopmann, Michael R. ; Mendoza, Luis ; Deutsch, Eric W...
Journal of the American Society for Mass Spectrometry.  27 (2016)  11 - p. 1728-1734 , 2016
Link: https://doi.org/10.1007/..
 
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12

Human SRMAtlas: A Resource of Targeted Assays to Quantify t..:

Kusebauch, Ulrike ; Campbell, David S. ; Deutsch, Eric W....
Cell.  166 (2016)  3 - p. 766-778 , 2016
Link: https://doi.org/10.1016/..
 
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13

Automated Validation of Results and Removal of Fragment Ion..:

Keller, Andrew ; Bader, Samuel L. ; Shteynberg, David..
Molecular & Cellular Proteomics.  14 (2015)  5 - p. 1411-1418 , 2015
Link: https://doi.org/10.1074/..
 
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14

reSpect: Software for Identification of High and Low Abunda..:

Shteynberg, David ; Mendoza, Luis ; Hoopmann, Michael R....
Journal of the American Society for Mass Spectrometry.  26 (2015)  11 - p. 1837-1847 , 2015
Link: https://doi.org/10.1007/..
 
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15

Trans‐Proteomic Pipeline, a standardized data processing pi..:

Deutsch, Eric W. ; Mendoza, Luis ; Shteynberg, David...
PROTEOMICS – Clinical Applications.  9 (2015)  7-8 - p. 745-754 , 2015
Link: https://doi.org/10.1002/..
 
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