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Sumner, Jeremy
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1

Embedding of Markov matrices for $$\varvec{d \leqslant 4}$$:

Baake, Michael ; Sumner, Jeremy
Journal of Mathematical Biology.  89 (2024)  2 - p. , 2024
Link: https://doi.org/10.1007/..
 
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2

Uniformization Stable Markov Models and Their Jordan Algebr..:

Cooper, Luke ; Sumner, Jeremy
SIAM Journal on Matrix Analysis and Applications.  44 (2023)  4 - p. 1822-1851 , 2023
Link: https://doi.org/10.1137/..
 
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3

Evaluation of the Relative Performance of the Subflattening..:

Stevenson, Joshua ; Holland, Barbara ; Charleston, Michael.
Bulletin of Mathematical Biology.  85 (2023)  3 - p. , 2023
Link: https://doi.org/10.1007/..
 
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4

Rearrangement Events on Circular Genomes:

Stevenson, Joshua ; Terauds, Venta ; Sumner, Jeremy
Bulletin of Mathematical Biology.  85 (2023)  11 - p. , 2023
Link: https://doi.org/10.1007/..
 
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5

On equal-input and monotone Markov matrices:

Baake, Michael ; Sumner, Jeremy
Advances in Applied Probability.  54 (2022)  2 - p. 460-492 , 2022
Link: https://doi.org/10.1017/..
 
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6

A new algebraic approach to genome rearrangement models:

Terauds, Venta ; Sumner, Jeremy
Journal of Mathematical Biology.  84 (2022)  6 - p. , 2022
Link: https://doi.org/10.1007/..
 
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7

Notes on Markov embedding:

Baake, Michael ; Sumner, Jeremy
Linear Algebra and its Applications.  594 (2020)  - p. 262-299 , 2020
Link: https://doi.org/10.1016/..
 
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8

Maximum Likelihood Estimates of Rearrangement Distance: Imp..:

Terauds, Venta ; Sumner, Jeremy
Bulletin of Mathematical Biology.  81 (2018)  2 - p. 535-567 , 2018
Link: https://doi.org/10.1007/..
 
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9

Maximum likelihood estimates of pairwise rearrangement dist..:

Serdoz, Stuart ; Egri-Nagy, Attila ; Sumner, Jeremy...
Journal of Theoretical Biology.  423 (2017)  - p. 31-40 , 2017
Link: https://doi.org/10.1016/..
 
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10

Markov Invariants for Phylogenetic Rate Matrices Derived fr..:

Jarvis, Peter ; Sumner, Jeremy
IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB).  9 (2012)  3 - p. 828-836 , 2012
Link: https://dl.acm.org/doi/1..
 
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11

Correction to: Matrix group structure and Markov invariants..:

Jarvis, Peter D. ; Sumner, Jeremy G.
Journal of Mathematical Biology.  82 (2021)  7 - p. , 2021
Link: https://doi.org/10.1007/..
 
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12

The impracticalities of multiplicatively-closed codon model..:

Shore, Julia A. ; Sumner, Jeremy G. ; Holland, Barbara R.
Journal of Mathematical Biology.  81 (2020)  2 - p. 549-573 , 2020
Link: https://doi.org/10.1007/..
 
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13

The Ancient Operational Code is Embedded in the Amino Acid ..:

Shore, Julia A. ; Holland, Barbara R. ; Sumner, Jeremy G...
Journal of Molecular Evolution.  88 (2019)  2 - p. 136-150 , 2019
Link: https://doi.org/10.1007/..
 
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14

Distinguishing Between Convergent Evolution and Violation o..:

Mitchell, Jonathan D ; Sumner, Jeremy G ; Holland, Barbara R.
Systematic Biology.  67 (2018)  5 - p. 905-915 , 2018
Link: https://doi.org/10.1093/..
 
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15

Lie-Markov Models Derived from Finite Semigroups:

Sumner, Jeremy G. ; Woodhams, Michael D.
Bulletin of Mathematical Biology.  81 (2018)  2 - p. 361-383 , 2018
Link: https://doi.org/10.1007/..
 
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