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Timme, Ruth E.
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1

Editorial: Integration of NGS in clinical and public health..:

Yang, Shangxin ; Kozyreva, Varvara K. ; Timme, Ruth E..
Frontiers in Public Health.  12 (2024)  - p. , 2024
Link: https://doi.org/10.3389/..
 
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2

PHA4GE quality control contextual data tags: standardized a..:

Griffiths, Emma J. ; Mendes, Inês ; Maguire, Finlay...
Microbial Genomics.  10 (2024)  6 - p. , 2024
Link: https://doi.org/10.1099/..
 
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3

Performance of methods for SARS-CoV-2 variant detection and..:

Kayikcioglu, Tunc ; Amirzadegan, Jasmine ; Rand, Hugh...
PeerJ.  11 (2023)  - p. e14596 , 2023
Link: https://doi.org/10.7717/..
 
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4

Putting everything in its place: using the INSDC compliant ..:

Timme, Ruth E. ; Karsch-Mizrachi, Ilene ; Waheed, Zahra...
Microbial Genomics.  9 (2023)  12 - p. , 2023
Link: https://doi.org/10.1099/..
 
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5

Enterobacteralesdraft genome sequences: 15 historical (1998..:

Crawford, Matthew A. ; Lascols, Christine ; Lomonaco, Sara...
Microbiology Resource Announcements.  12 (2023)  9 - p. , 2023
Link: https://doi.org/10.1128/..
 
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6

Future-proofing and maximizing the utility of metadata: The..:

Griffiths, Emma J ; Timme, Ruth E ; Mendes, Catarina Inês...
GigaScience.  11 (2022)  - p. , 2022
Link: https://doi.org/10.1093/..
 
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7

Phylogeny of Salmonella enterica subspecies arizonae by who..:

Shariat, Nikki W. ; Timme, Ruth E. ; Walters, Abigail T.
Microbial Genomics.  7 (2021)  2 - p. , 2021
Link: https://doi.org/10.1099/..
 
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8

Antimicrobial and Genomic Characterization of Salmonella Ni..:

Raufu, Ibrahim A ; Ahmed, Olayiwola A ; Aremu, Abdulfatai...
The Journal of Infection in Developing Countries.  15 (2021)  12 - p. 1899-1909 , 2021
Link: https://doi.org/10.3855/..
 
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9

Optimizing open data to support one health: best practices ..:

Timme, Ruth E. ; Wolfgang, William J. ; Balkey, Maria...
One Health Outlook.  2 (2020)  1 - p. , 2020
Link: https://doi.org/10.1186/..
 
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10

Gen-FS coordinated proficiency test data for genomic foodbo..:

Timme, Ruth E. ; Lafon, Patricia C. ; Balkey, Maria...
Scientific Data.  7 (2020)  1 - p. , 2020
Link: https://doi.org/10.1038/..
 
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11

Resistome of carbapenem- and colistin-resistant Klebsiella ..:

Lomonaco, Sara ; Crawford, Matthew A. ; Lascols, Christine...
PLOS ONE.  13 (2018)  6 - p. e0198526 , 2018
Link: https://doi.org/10.1371/..
 
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12

GenomeTrakr proficiency testing for foodborne pathogen surv..:

Timme, Ruth E. ; Rand, Hugh ; Sanchez Leon, Maria...
Microbial Genomics.  4 (2018)  7 - p. , 2018
Link: https://doi.org/10.1099/..
 
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13

TreeToReads - a pipeline for simulating raw reads from phyl..:

McTavish, Emily Jane ; Pettengill, James ; Davis, Steven...
BMC Bioinformatics.  18 (2017)  1 - p. , 2017
Link: https://doi.org/10.1186/..
 
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14

Benchmark datasets for phylogenomic pipeline validation, ap..:

Timme, Ruth E. ; Rand, Hugh ; Shumway, Martin...
PeerJ.  5 (2017)  - p. e3893 , 2017
Link: https://doi.org/10.7717/..
 
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15

An analysis of Echinacea chloroplast genomes: Implications ..:

Zhang, Ning ; Erickson, David L. ; Ramachandran, Padmini...
Scientific Reports.  7 (2017)  1 - p. , 2017
Link: https://doi.org/10.1038/..
 
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