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Tsuyuzaki, Koki
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1

iTensor: An R package for independent componentanalysis-bas..:

Tsuyuzaki, Koki
Journal of Open Source Software.  8 (2023)  87 - p. 5496 , 2023
Link: https://doi.org/10.21105..
 
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2

dcTensor: An R package for discrete matrix/tensordecomposit..:

Tsuyuzaki, Koki
Journal of Open Source Software.  8 (2023)  88 - p. 5664 , 2023
Link: https://doi.org/10.21105..
 
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3

Sctensor detects many-to-many cell–cell interactions from s..:

Tsuyuzaki, Koki ; Ishii, Manabu ; Nikaido, Itoshi
BMC Bioinformatics.  24 (2023)  1 - p. , 2023
Link: https://doi.org/10.1186/..
 
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4

Non-negative tensor factorization workflow for time series ..:

Tsuyuzaki, Koki ; Yoshida, Naoki ; Ishikawa, Tetsuo..
STAR Protocols.  4 (2023)  3 - p. 102318 , 2023
Link: https://doi.org/10.1016/..
 
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5

WormTensor: a clustering method for time-series whole-brain..:

Tsuyuzaki, Koki ; Yamamoto, Kentaro ; Toyoshima, Yu...
BMC Bioinformatics.  24 (2023)  1 - p. , 2023
Link: https://doi.org/10.1186/..
 
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6

nnTensor: An R package for non-negative matrix/tensordecomp..:

Tsuyuzaki, Koki ; Nikaido, Itoshi
Journal of Open Source Software.  8 (2023)  84 - p. 5015 , 2023
Link: https://doi.org/10.21105..
 
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7

Detecting time-evolving phenotypic components of adverse re..:

Ikeda, Kei ; Nakada, Taka-Aki ; Kageyama, Takahiro...
iScience.  25 (2022)  10 - p. 105237 , 2022
Link: https://doi.org/10.1016/..
 
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8

Improved MeSH analysis software tools for farm animals:

Amorim, Sabrina T. ; Tsuyuzaki, Koki ; Nikaido, Itoshi.
Animal Genetics.  53 (2021)  1 - p. 171-172 , 2021
Link: https://doi.org/10.1111/..
 
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9

Benchmarking principal component analysis for large-scale s..:

Tsuyuzaki, Koki ; Sato, Hiroyuki ; Sato, Kenta.
Genome Biology.  21 (2020)  1 - p. , 2020
Link: https://doi.org/10.1186/..
 
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10

An NMF-based approach to discover overlooked differentially..:

Matsumoto, Hirotaka ; Hayashi, Tetsutaro ; Ozaki, Haruka...
NAR Genomics and Bioinformatics.  2 (2019)  1 - p. , 2019
Link: https://doi.org/10.1093/..
 
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11

CellFishing.jl: an ultrafast and scalable cell search metho..:

Sato, Kenta ; Tsuyuzaki, Koki ; Shimizu, Kentaro.
Genome Biology.  20 (2019)  1 - p. , 2019
Link: https://doi.org/10.1186/..
 
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12

MeSH ORA framework: R/Bioconductor packages to support MeSH..:

Tsuyuzaki, Koki ; Morota, Gota ; Ishii, Manabu...
BMC Bioinformatics.  16 (2015)  1 - p. , 2015
Link: https://doi.org/10.1186/..
 
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13

Two-way AIC: detection of differentially expressed genes fr..:

Tsuyuzaki, Koki ; Tominaga, Daisuke ; Kwon, Yeondae.
BMC Genomics.  14 (2013)  S2 - p. , 2013
Link: https://doi.org/10.1186/..
 
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14

Reference files for MahaRank:

Tsuyuzaki, Koki
doi:10.5281/zenodo.8351792.  , 2023
Link: https://zenodo.org/recor..
 
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15

Sctensor detects many-to-many cell–cell interactions from s..:

Tsuyuzaki, Koki ; Ishii, Manabu ; Nikaido, Itoshi
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10631077/.  , 2023
Link: http://www.ncbi.nlm.nih...
 
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