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Tyzack, Jonathan D.
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Online (44)
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Articles (Online) (26)
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1
EzMechanism: an automated tool to propose catalytic mechani..:
Ribeiro, Antonio J. M.
;
Riziotis, Ioannis G.
;
Tyzack, Jonathan D.
..
Nature Methods. 20 (2023) 10 - p. 1516-1522 , 2023
Link:
https://doi.org/10.1038/..
?
2
Using mechanism similarity to understand enzyme evolution:
Ribeiro, António J. M.
;
Riziotis, Ioannis G.
;
Tyzack, Jonathan D.
..
Biophysical Reviews. 14 (2022) 6 - p. 1273-1280 , 2022
Link:
https://doi.org/10.1007/..
?
3
GRaSP-web: a machine learning strategy to predict binding s..:
Santana, Charles A
;
Izidoro, Sandro C
;
de Melo-Minardi, Raquel C
...
Nucleic Acids Research. 50 (2022) W1 - p. W392-W397 , 2022
Link:
https://doi.org/10.1093/..
?
4
Structure-Guided Engineering of a Family IV Cold-Adapted Es..:
Noby, Nehad
;
Johnson, Rachel L.
;
Tyzack, Jonathan D.
...
International Journal of Molecular Sciences. 23 (2022) 9 - p. 4703 , 2022
Link:
https://doi.org/10.3390/..
?
5
The Enzyme Portal: an integrative tool for enzyme informati..:
Zaru, Rossana
;
Onwubiko, Joseph
;
Ribeiro, Antonio J. M.
...
The FEBS Journal. 289 (2021) 19 - p. 5875-5890 , 2021
Link:
https://doi.org/10.1111/..
?
6
A global analysis of function and conservation of catalytic..:
Ribeiro, António J.M.
;
Tyzack, Jonathan D.
;
Borkakoti, Neera
..
Journal of Biological Chemistry. 295 (2020) 2 - p. 314-324 , 2020
Link:
https://doi.org/10.1074/..
?
7
Finding enzyme cofactors in Protein Data Bank:
Mukhopadhyay, Abhik
;
Borkakoti, Neera
;
Pravda, Lukáš
...
Bioinformatics. 35 (2019) 18 - p. 3510-3511 , 2019
Link:
https://doi.org/10.1093/..
?
8
Computational methods and tools to predict cytochrome P450 ..:
Tyzack, Jonathan D.
;
Kirchmair, Johannes
Chemical Biology & Drug Design. 93 (2019) 4 - p. 377-386 , 2019
Link:
https://doi.org/10.1111/..
?
9
Exploring Chemical Biosynthetic Design Space with Transform..:
Tyzack, Jonathan D.
;
Ribeiro, Antonio J. M.
;
Borkakoti, Neera
.
ACS Synthetic Biology. 8 (2019) 11 - p. 2494-2506 , 2019
Link:
https://doi.org/10.1021/..
?
10
Identifying pseudoenzymes using functional annotation: pitf..:
Ribeiro, Antonio J. M.
;
Tyzack, Jonathan D.
;
Borkakoti, Neera
.
The FEBS Journal. 287 (2019) 19 - p. 4128-4140 , 2019
Link:
https://doi.org/10.1111/..
?
11
Ranking Enzyme Structures in the PDB by Bound Ligand Simila..:
Tyzack, Jonathan D.
;
Fernando, Laurent
;
Ribeiro, Antonio J.M.
..
Structure. 26 (2018) 4 - p. 565-571.e3 , 2018
Link:
https://doi.org/10.1016/..
?
12
Can the inhibition of cytochrome P450 in aquatic invertebra..:
Gottardi, Michele
;
Tyzack, Jonathan D.
;
Bender, Andreas
.
Aquatic Toxicology. 201 (2018) - p. 11-20 , 2018
Link:
https://doi.org/10.1016/..
?
13
WhichP450: a multi-class categorical model to predict the m..:
Hunt, Peter A.
;
Segall, Matthew D.
;
Tyzack, Jonathan D.
Journal of Computer-Aided Molecular Design. 32 (2018) 4 - p. 537-546 , 2018
Link:
https://doi.org/10.1007/..
?
14
Transform-MinER: transforming molecules in enzyme reactions:
Tyzack, Jonathan D
;
Ribeiro, Antonio J M
;
Borkakoti, Neera
..
Bioinformatics. 34 (2018) 20 - p. 3597-3599 , 2018
Link:
https://doi.org/10.1093/..
?
15
Understanding enzyme function evolution from a computationa..:
Tyzack, Jonathan D
;
Furnham, Nicholas
;
Sillitoe, Ian
..
Current Opinion in Structural Biology. 47 (2017) - p. 131-139 , 2017
Link:
https://doi.org/10.1016/..
1-15
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