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Wimmenauer, Florian
18  results:
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1

Application of transfer learning to predict drug-induced hu..:

O'Donovan, Shauna D. ; Cavill, Rachel ; Wimmenauer, Florian...
PLOS ONE.  18 (2023)  11 - p. e0292030 , 2023
Link: https://doi.org/10.1371/..
 
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2

Use of deep learning methods to translate drug-induced gene..:

O'Donovan, Shauna D. ; Driessens, Kurt ; Lopatta, Daniel...
PLOS ONE.  15 (2020)  8 - p. e0236392 , 2020
Link: https://doi.org/10.1371/..
 
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Monte-Carlo Tree-Search for Leveraging Performance of Black..:

Wimmenauer, Florian ; Mihalák, Matúš ; Winands, Mark H. M
http://arxiv.org/abs/2212.07543.  , 2022
Link: http://arxiv.org/abs/221..
 
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Use of deep learning methods to translate drug-induced gene..:

O'Donovan, Shauna D ; Driessens, Kurt ; Lopatta, Daniel...
O'Donovan , S D , Driessens , K , Lopatta , D , Wimmenauer , F , Lukas , A , Neeven , J , Stumm , T , Smirnov , E , Lenz , M , Ertaylan , G , Jennen , D G J , van Riel , N A W , Cavill , R , Peeters , R L M & de Kok , T M C M 2020 , ' Use of deep learning methods to translate drug-induced gene expression changes from rat to human primary hepatocytes ' , PLoS ONE , vol. 15 , no. 8 , e0236392 . https://doi.org/10.1371/journal.pone.0236392.  , 2020
Link: https://research.tue.nl/..
 
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Use of deep learning methods to translate drug-induced gene..:

O'Donovan, Shauna D ; Driessens, Kurt ; Lopatta, Daniel...
O'Donovan , S D , Driessens , K , Lopatta , D , Wimmenauer , F , Lukas , A , Neeven , J , Smirnov , E , Lenz , M , Ertaylan , G , Jennen , D G J , van Riel , N A W , Cavill , R , Peeters , R L M & de Kok , T M C M 2020 , ' Use of deep learning methods to translate drug-induced gene expression changes from rat to human primary hepatocytes ' , PLOS ONE , vol. 15 , no. 8 , e0236392 . https://doi.org/10.1371/journal.pone.0236392.  , 2020
Link: https://cris.maastrichtu..
 
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Use of deep learning methods to translate drug-induced gene..:

O'Donovan, Shauna D ; Driessens, Kurt ; Lopatta, Daniel...
https://edepot.wur.nl/530242.  , 2020
Link: https://research.wur.nl/..
 
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7

Application of transfer learning to predict drug-induced hu..:

Shauna D O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0292030&type=printable.  , 2023
Link: https://doi.org/10.1371/..
 
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8

Input data and model predictions for time series of the gen..:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.g004.  , 2023
Link: https://doi.org/10.1371/..
 
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9

Additional figures:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.s001.  , 2023
Link: https://doi.org/10.1371/..
 
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Schema of the implemented unsupervised domain adaptation ne..:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.g002.  , 2023
Link: https://doi.org/10.1371/..
 
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11

Visualisation of the effect of domain adaptation on the emb..:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.g003.  , 2023
Link: https://doi.org/10.1371/..
 
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12

Average mean absolute error from leave one out cross valida..:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.t001.  , 2023
Link: https://doi.org/10.1371/..
 
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13

All model scripts are publicly available from GitHub reposi..:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.s003.  , 2023
Link: https://doi.org/10.1371/..
 
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14

Data information:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.s002.  , 2023
Link: https://doi.org/10.1371/..
 
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15

Overview of toxicogenomics data from TG-GATEs included in t..:

Shauna D. O'Donovan ; Rachel Cavill ; Florian Wimmenauer...
doi:10.1371/journal.pone.0292030.g001.  , 2023
Link: https://doi.org/10.1371/..
 
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